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  • Top cofit genes for Psyr_2680 from Pseudomonas syringae pv. syringae B728a

    Binding-protein-dependent transport systems inner membrane component
    SEED: Putative glutathione transporter, permease component
    KEGG: peptide/nickel transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2615 Amino acid adenylation no 0.43
    2 Psyr_2614 Amino acid adenylation no 0.40
    3 Psyr_1515 hypothetical protein no 0.40
    4 Psyr_3803 MscS Mechanosensitive ion channel no 0.39
    5 Psyr_2613 Cyclic peptide transporter no 0.39
    6 Psyr_2616 Amino acid adenylation no 0.39
    7 Psyr_0336 Outer membrane autotransporter barrel no 0.38
    8 Psyr_1196 type III secretion protein HrpD no 0.37
    9 Psyr_1628 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, N-terminal 0.34 0.36
    10 Psyr_0026 Sulfate transporter/antisigma-factor antagonist STAS:Sulphate transporter 0.57 0.36
    11 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase 0.84 0.36
    12 Psyr_4441 heat shock protein YegD no 0.36
    13 Psyr_0288 Carbonate dehydratase 0.33 0.35
    14 Psyr_1211 type III secretion protein HrpP no 0.35
    15 Psyr_2608 Amino acid adenylation no 0.35
    16 Psyr_1218 type III helper protein HrpK1 no 0.35
    17 Psyr_1217 Sigma-70 region 2:Sigma-70 region 4 no 0.35
    18 Psyr_2186 Senescence marker protein-30 (SMP-30) no 0.34
    19 Psyr_1411 4-hydroxybenzoyl-CoA thioesterase no 0.34
    20 Psyr_3166 ABC transporter, periplasmic substrate-binding protein, putative no 0.34

    Or look for negative cofitness