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Cofit
Protein
Homologs
Top cofit genes for Psyr_2646 from
Pseudomonas syringae pv. syringae B728a
Radical SAM
SEED: Transcriptional regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_2647
hypothetical protein
0.56
0.56
2
Psyr
_1881
conserved hypothetical protein
no
0.55
3
Psyr
_2709
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region
no
0.47
4
Psyr
_2922
Permease for cytosine/purines, uracil, thiamine, allantoin
no
0.45
5
Psyr
_4887
Peptidase S41A, C-terminal protease
no
0.44
6
Psyr
_3229
Glycosyl transferase, group 1
no
0.43
7
Psyr
_0452
HylII
no
0.43
8
Psyr
_2469
Propionyl-CoA carboxylase
no
0.42
9
Psyr
_2340
Peptidylprolyl isomerase, FKBP-type
no
0.42
10
Psyr
_3123
type III effector HopAH2
no
0.41
11
Psyr
_4092
Glutathione S-transferase, N-terminal
no
0.41
12
Psyr
_2732
conserved hypothetical protein; putative signal peptide
no
0.40
13
Psyr
_2478
surface antigen (D15):Surface antigen variable number
no
0.39
14
Psyr
_0234
transcriptional regulator, AsnC family
no
0.39
15
Psyr
_2081
conserved hypothetical protein
no
0.39
16
Psyr
_4871
hypothetical protein
no
0.39
17
Psyr
_2374
ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal
no
0.38
18
Psyr
_2196
Urease accessory protein UreG
no
0.38
19
Psyr
_1758
extracellular solute-binding protein, family 5
no
0.38
20
Psyr
_1704
Amino acid adenylation
no
0.38
Or look for
negative cofitness