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  • Top cofit genes for Psyr_2614 from Pseudomonas syringae pv. syringae B728a

    Amino acid adenylation
    SEED: Non-ribosomal peptide synthetase modules, pyoverdine??

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2615 Amino acid adenylation 0.88 0.91
    2 Psyr_2616 Amino acid adenylation 0.88 0.88
    3 Psyr_1218 type III helper protein HrpK1 0.78 0.82
    4 Psyr_2613 Cyclic peptide transporter 0.81 0.81
    5 Psyr_2608 Amino acid adenylation 0.78 0.79
    6 Psyr_1191 type III transcriptional regulator HrpS 0.87 0.75
    7 Psyr_1208 type III secretion protein HrcR 0.90 0.74
    8 Psyr_1200 outer-membrane type III secretion protein HrcC 0.83 0.73
    9 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE 0.74 0.72
    10 Psyr_1213 type III secretion cytoplasmic ATPase HrcN 0.74 0.71
    11 Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF 0.68 0.71
    12 Psyr_1215 Type III secretion protein HrcV 0.78 0.71
    13 Psyr_1217 Sigma-70 region 2:Sigma-70 region 4 0.66 0.71
    14 Psyr_0219 phosphomannomutase 0.77 0.69
    15 Psyr_1705 Amino acid adenylation 0.83 0.66
    16 Psyr_0758 beta-fructofuranosidase 0.91 0.65
    17 Psyr_1197 type III secretion protein HrpE 0.71 0.65
    18 Psyr_1216 type III secretion outer membrane protein PopN 0.70 0.65
    19 Psyr_1205 type III secretion protein HrcU 0.82 0.64
    20 Psyr_1211 type III secretion protein HrpP 0.70 0.64

    Or look for negative cofitness