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  • Top cofit genes for Psyr_2613 from Pseudomonas syringae pv. syringae B728a

    Cyclic peptide transporter
    SEED: ABC-type siderophore export system, fused ATPase and permease components

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2616 Amino acid adenylation 0.73 0.83
    2 Psyr_1218 type III helper protein HrpK1 0.81 0.83
    3 Psyr_2614 Amino acid adenylation 0.81 0.81
    4 Psyr_1216 type III secretion outer membrane protein PopN no 0.79
    5 Psyr_1200 outer-membrane type III secretion protein HrcC 0.74 0.79
    6 Psyr_2615 Amino acid adenylation 0.78 0.78
    7 Psyr_1208 type III secretion protein HrcR 0.81 0.78
    8 Psyr_1217 Sigma-70 region 2:Sigma-70 region 4 no 0.78
    9 Psyr_1191 type III transcriptional regulator HrpS 0.71 0.77
    10 Psyr_1211 type III secretion protein HrpP no 0.77
    11 Psyr_1213 type III secretion cytoplasmic ATPase HrcN 0.68 0.76
    12 Psyr_2608 Amino acid adenylation 0.68 0.76
    13 Psyr_0758 beta-fructofuranosidase 0.88 0.75
    14 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE 0.75 0.75
    15 Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF 0.67 0.74
    16 Psyr_1215 Type III secretion protein HrcV 0.75 0.74
    17 Psyr_0219 phosphomannomutase 0.82 0.73
    18 Psyr_1197 type III secretion protein HrpE no 0.72
    19 Psyr_1625 2-oxo-acid dehydrogenase E1 component homodimeric type no 0.72
    20 Psyr_1205 type III secretion protein HrcU 0.70 0.72

    Or look for negative cofitness