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  • Top cofit genes for Psyr_2602 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, LuxR family
    SEED: regulatory protein, LuxR

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2601 regulatory protein, LuxR 0.54 0.71
    2 Psyr_0748 Major facilitator superfamily no 0.59
    3 Psyr_0750 conserved hypothetical protein no 0.57
    4 Psyr_3807 hypothetical protein no 0.55
    5 Psyr_2607 regulatory protein, LuxR no 0.54
    6 Psyr_3089 Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein 0.58 0.53
    7 Psyr_0098 Protein of unknown function DUF87 0.46 0.53
    8 Psyr_1460 hypothetical protein no 0.52
    9 Psyr_1613 septum site-determining protein MinC no 0.51
    10 Psyr_2632 virulence protein SrfB no 0.50
    11 Psyr_0475 Protein of unknown function YGGT no 0.50
    12 Psyr_3524 Aldehyde dehydrogenase (NAD+) no 0.49
    13 Psyr_3817 conserved hypothetical protein no 0.49
    14 Psyr_1929 hypothetical protein 0.44 0.49
    15 Psyr_2642 hypothetical protein no 0.49
    16 Psyr_2346 conserved hypothetical protein no 0.49
    17 Psyr_4315 Asparagine synthase, glutamine-hydrolyzing 0.46 0.48
    18 Psyr_4042 hypothetical protein no 0.48
    19 Psyr_2322 YD repeat protein no 0.48
    20 Psyr_0928 hypothetical protein 0.52 0.48

    Or look for negative cofitness