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  • Top cofit genes for Psyr_2576 from Pseudomonas syringae pv. syringae B728a

    Amino acid adenylation
    SEED: Non-ribosomal peptide synthetase modules, pyoverdine??

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2577 Amino acid adenylation 0.29 0.57
    2 Psyr_0347 hypothetical protein no 0.43
    3 Psyr_1794 Amino acid adenylation 0.35 0.41
    4 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA no 0.40
    5 Psyr_0958 amine oxidase, flavin-containing no 0.38
    6 Psyr_0632 Protein of unknown function DUF1375 no 0.37
    7 Psyr_0671 nucleoside ABC transporter membrane protein no 0.36
    8 Psyr_2231 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase no 0.36
    9 Psyr_4419 Cobalamin (vitamin B12) biosynthesis CbiD protein no 0.34
    10 Psyr_1552 CDS no 0.34
    11 Psyr_3960 conserved hypothetical protein no 0.33
    12 Psyr_3365 Transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase no 0.33
    13 Psyr_1133 Fimbrial biogenesis outer membrane usher protein no 0.33
    14 Psyr_0989 Lysine exporter protein (LYSE/YGGA) no 0.33
    15 Psyr_5009 conserved hypothetical protein no 0.32
    16 Psyr_1540 hypothetical protein no 0.32
    17 Psyr_3792 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal no 0.32
    18 Psyr_1499 Protein of unknown function DUF no 0.32
    19 Psyr_3497 SH3-like region no 0.32
    20 Psyr_3654 conserved hypothetical protein no 0.31

    Or look for negative cofitness