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  • Top cofit genes for Psyr_2542 from Pseudomonas syringae pv. syringae B728a

    extracellular solute-binding protein, family 5
    SEED: Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)
    KEGG: peptide/nickel transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3427 conserved hypothetical protein no 0.39
    2 Psyr_1487 conserved hypothetical protein no 0.39
    3 Psyr_0167 hypothetical protein no 0.39
    4 Psyr_1868 hypothetical protein no 0.39
    5 Psyr_4676 Protein of unknown function UPF0057 no 0.38
    6 Psyr_3600 transcriptional regulator, LysR family no 0.38
    7 Psyr_2086 2-methylcitrate synthase 0.32 0.38
    8 Psyr_5101 Glyoxalase/bleomycin resistance protein/dioxygenase no 0.37
    9 Psyr_0531 LmbE-like protein no 0.36
    10 Psyr_0529 Glycosyl transferase, group 1 no 0.36
    11 Psyr_2616 Amino acid adenylation no 0.36
    12 Psyr_2615 Amino acid adenylation no 0.36
    13 Psyr_4659 type III effector HopAB1 no 0.36
    14 Psyr_3886 methionyl-tRNA synthetase 0.63 0.35
    15 Psyr_0267 Endonuclease/exonuclease/phosphatase no 0.35
    16 Psyr_1462 GCN5-related N-acetyltransferase no 0.35
    17 Psyr_1714 exonuclease SbcC no 0.34
    18 Psyr_3816 hypothetical protein no 0.34
    19 Psyr_4669 pyrroloquinoline quinone synthesis related protease (pqqF), Metallo peptidase, MEROPS family M16A no 0.34
    20 Psyr_2942 amino acid ABC transporter ATP-binding protein, PAAT family no 0.34

    Or look for negative cofitness