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  • Top cofit genes for Psyr_2505 from Pseudomonas syringae pv. syringae B728a

    amino acid ABC transporter membrane protein 2, PAAT family
    SEED: Amino acid ABC transporter, permease protein
    KEGG: polar amino acid transport system permease protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4735 GTP-binding protein, HSR1-related protein no 0.39
    2 Psyr_4062 Pyridoxamine 5'-phosphate oxidase-related protein no 0.31
    3 Psyr_3221 DegT/DnrJ/EryC1/StrS aminotransferase no 0.31
    4 Psyr_3037 membrane protein, putative no 0.30
    5 Psyr_3325 fumarylacetoacetate hydrolase 0.55 0.30
    6 Psyr_0741 transcriptional regulator, TetR family no 0.29
    7 Psyr_1079 conserved hypothetical protein no 0.29
    8 Psyr_4284 Molybdopterin dehydrogenase, FAD-binding:CO dehydrogenase flavoprotein, C-terminal no 0.28
    9 Psyr_0843 TPR repeat protein no 0.28
    10 Psyr_0718 type IV pilus assembly protein PilX no 0.28
    11 Psyr_2521 conserved hypothetical protein no 0.26
    12 Psyr_0819 TatD-related deoxyribonuclease no 0.26
    13 Psyr_1367 Zinc-containing alcohol dehydrogenase superfamily no 0.26
    14 Psyr_3718 hypothetical protein no 0.26
    15 Psyr_1602 ABC transporter 0.61 0.26
    16 Psyr_3835 hypothetical protein no 0.25
    17 Psyr_2507 Endoribonuclease L-PSP 0.58 0.25
    18 Psyr_2479 Protein of unknown function DUF490 no 0.25
    19 Psyr_2413 succinate semialdehyde dehydrogenase 0.18 0.24
    20 Psyr_2718 Major royal jelly protein no 0.24

    Or look for negative cofitness