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  • Top cofit genes for Psyr_2485 from Pseudomonas syringae pv. syringae B728a

    RND efflux system, outer membrane lipoprotein, NodT
    SEED: Heavy metal RND efflux outer membrane protein, CzcC family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2483 Acriflavin resistance protein 0.95 0.82
    2 Psyr_2484 Acriflavin resistance protein 0.87 0.79
    3 Psyr_2482 Secretion protein HlyD 0.76 0.57
    4 Psyr_1965 Twin-arginine translocation pathway signal 0.56 0.39
    5 Psyr_0544 hydroxymethylpyrimidine synthase 0.48 0.39
    6 Psyr_3695 RelA/SpoT protein no 0.39
    7 Psyr_4277 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region no 0.37
    8 Psyr_1148 branched chain amino acid aminotransferase apoenzyme no 0.36
    9 Psyr_3572 acetyl-coenzyme A synthetase 0.60 0.36
    10 Psyr_4700 malate synthase no 0.35
    11 Psyr_1254 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase no 0.35
    12 Psyr_1963 Cyclic peptide transporter no 0.35
    13 Psyr_1757 Binding-protein-dependent transport systems inner membrane component 0.41 0.35
    14 Psyr_1251 quinoprotein 0.45 0.34
    15 Psyr_0401 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) no 0.34
    16 Psyr_1318 Phosphoenolpyruvate carboxylase no 0.33
    17 Psyr_0286 conserved hypothetical protein no 0.33
    18 Psyr_3238 3-oxoacid CoA-transferase no 0.33
    19 Psyr_1624 transcriptional regulator, MarR family no 0.32
    20 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.82 0.31

    Or look for negative cofitness