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  • Top cofit genes for Psyr_2482 from Pseudomonas syringae pv. syringae B728a

    Secretion protein HlyD
    SEED: RND transporter, membrane fusion protein
    KEGG: putative multidrug efflux transporter MdtA

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2485 RND efflux system, outer membrane lipoprotein, NodT 0.82 0.57
    2 Psyr_2483 Acriflavin resistance protein 0.98 0.51
    3 Psyr_2484 Acriflavin resistance protein 0.88 0.50
    4 Psyr_0989 Lysine exporter protein (LYSE/YGGA) no 0.36
    5 Psyr_2243 Endoribonuclease L-PSP no 0.33
    6 Psyr_3824 conserved hypothetical protein no 0.33
    7 Psyr_1696 Protein of unknown function DUF350 no 0.31
    8 Psyr_4064 lipoprotein, putative no 0.31
    9 Psyr_4909 gamma-aminobutyrate:proton symporter, AAT family 0.22 0.30
    10 Psyr_1793 Amino acid adenylation no 0.30
    11 Psyr_5080 Cyclopropane-fatty-acyl-phospholipid synthase 0.45 0.30
    12 Psyr_3969 Putative ammonia monooxygenase no 0.29
    13 Psyr_3521 transcriptional regulator, LysR family no 0.29
    14 Psyr_3501 General substrate transporter:Major facilitator superfamily 0.30 0.29
    15 Psyr_2358 acetylornithine aminotransferase apoenzyme no 0.29
    16 Psyr_0091 succinate semialdehyde dehydrogenase 0.30 0.28
    17 Psyr_4798 conserved hypothetical protein no 0.28
    18 Psyr_0271 conserved hypothetical protein no 0.28
    19 Psyr_3102 transcriptional regulator, LysR family no 0.27
    20 Psyr_2799 hypothetical protein no 0.27

    Or look for negative cofitness