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  • Top cofit genes for Psyr_2470 from Pseudomonas syringae pv. syringae B728a

    isovaleryl-CoA dehydrogenase
    SEED: Isovaleryl-CoA dehydrogenase (EC 1.3.8.4)
    KEGG: isovaleryl-CoA dehydrogenase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1922 UBA/THIF-type NAD/FAD binding fold protein no 0.38
    2 Psyr_1439 Beta-lactamase 0.48 0.37
    3 Psyr_3613 Glutathione peroxidase no 0.34
    4 Psyr_3857 conserved hypothetical protein no 0.34
    5 Psyr_2644 Uncharacterized protein conserved in bacteria-like protein no 0.33
    6 Psyr_4979 hypothetical protein no 0.33
    7 Psyr_2518 conserved hypothetical protein no 0.33
    8 Psyr_1925 diaminobutyrate aminotransferase apoenzyme no 0.33
    9 Psyr_1037 ribosomal subunit interface protein, putative 0.23 0.32
    10 Psyr_0938 hypothetical protein no 0.32
    11 Psyr_1050 conserved hypothetical protein no 0.31
    12 Psyr_1180 hypothetical protein no 0.31
    13 Psyr_4310 hypothetical protein no 0.31
    14 Psyr_2109 methyl-accepting chemotaxis sensory transducer no 0.31
    15 Psyr_0738 type III effector protein AvrRpm1 no 0.30
    16 Psyr_0956 Cyclopropane-fatty-acyl-phospholipid synthase 0.39 0.30
    17 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) 0.74 0.30
    18 Psyr_3891 hypothetical protein no 0.30
    19 Psyr_1923 hypothetical protein no 0.29
    20 Psyr_3164 Protein of unknown function UPF0005 0.28 0.29

    Or look for negative cofitness