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  • Top cofit genes for Psyr_2422 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family
    KEGG: LysR family transcriptional regulator, transcriptional activator of nhaA

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2427 gamma-glutamylputrescine oxidase no 0.45
    2 Psyr_2907 PpiC-type peptidyl-prolyl cis-trans isomerase no 0.43
    3 Psyr_3297 CheW protein 0.54 0.39
    4 Psyr_2240 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer 0.53 0.38
    5 Psyr_2598 conserved hypothetical protein, putative DNA helicase no 0.38
    6 Psyr_2481 thiol peroxidase (atypical 2-Cys peroxiredoxin) no 0.38
    7 Psyr_0255 glutamate-cysteine ligase 0.47 0.38
    8 Psyr_RNA61 tRNA-Gly no 0.37
    9 Psyr_1877 EthD no 0.36
    10 Psyr_1461 hypothetical protein no 0.36
    11 Psyr_2824 conserved hypothetical protein no 0.36
    12 Psyr_4355 hypothetical protein no 0.35
    13 Psyr_0188 Protein of unknown function UPF0047 no 0.35
    14 Psyr_4755 hydrolase, alpha/beta fold family 0.43 0.35
    15 Psyr_4259 ATP-dependent protease, putative no 0.35
    16 Psyr_3106 phosphate ABC transporter substrate-binding protein, PhoT family 0.55 0.35
    17 Psyr_0213 RNAse PH 0.43 0.34
    18 Psyr_2540 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal 0.33 0.34
    19 Psyr_4712 serine hydroxymethyltransferase 0.53 0.34
    20 Psyr_2433 conserved hypothetical protein no 0.33

    Or look for negative cofitness