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  • Top cofit genes for Psyr_2421 from Pseudomonas syringae pv. syringae B728a

    Major facilitator superfamily
    SEED: Major facilitator family transporter

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1982 transcriptional regulator, LysR family no 0.45
    2 Psyr_4069 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal no 0.35
    3 Psyr_2717 Antibiotic biosynthesis monooxygenase no 0.35
    4 Psyr_4175 Transport-associated protein no 0.35
    5 Psyr_4336 ribosomal large subunit pseudouridine synthase E no 0.34
    6 Psyr_4571 Protein of unknown function DUF805 0.14 0.34
    7 Psyr_4919 type III effector protein AvrPto1 no 0.33
    8 Psyr_0297 amino acid ABC transporter membrane protein 1, PAAT family no 0.32
    9 Psyr_0038 Protein of unknown function DUF1161 no 0.32
    10 Psyr_4986 YD repeat protein no 0.32
    11 Psyr_1062 alginate biosynthesis protein Alg8 no 0.31
    12 Psyr_3044 Paraquat-inducible protein A no 0.31
    13 Psyr_4578 conserved hypothetical protein no 0.31
    14 Psyr_2510 2-keto-3-deoxygluconate kinase no 0.30
    15 Psyr_4694 Binding-protein-dependent transport systems inner membrane component no 0.30
    16 Psyr_4466 Thioredoxin no 0.30
    17 Psyr_2871 CDS no 0.29
    18 Psyr_0705 CreA no 0.29
    19 Psyr_4489 putative cytoplasmic protein no 0.29
    20 Psyr_2908 Phosphoglucomutase, alpha-D-glucose phosphate-specific no 0.29

    Or look for negative cofitness