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  • Top cofit genes for Psyr_2401 from Pseudomonas syringae pv. syringae B728a

    extracellular solute-binding protein, family 1
    SEED: ABC transporter, periplasmic spermidine putrescine-binding protein potD
    KEGG: putative spermidine/putrescine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3521 transcriptional regulator, LysR family no 0.64
    2 Psyr_1528 Arc-like DNA binding protein no 0.60
    3 Psyr_2117 conserved hypothetical protein no 0.58
    4 Psyr_2930 Glyoxalase/bleomycin resistance protein/dioxygenase no 0.58
    5 Psyr_2449 Response regulator receiver no 0.56
    6 Psyr_2243 Endoribonuclease L-PSP no 0.54
    7 Psyr_2134 protein of unknown function DUF903 no 0.54
    8 Psyr_2706 gamma-glutamyl-gamma-aminobutyrate hydrolase no 0.54
    9 Psyr_1304 CheW-like protein no 0.53
    10 Psyr_0970 Phosphoribosyltransferase no 0.52
    11 Psyr_4355 hypothetical protein 0.48 0.52
    12 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase no 0.52
    13 Psyr_1946 diaminobutyrate aminotransferase apoenzyme no 0.49
    14 Psyr_1960 Non-ribosomal peptide synthase:Amino acid adenylation no 0.49
    15 Psyr_3024 Peptidase M14, carboxypeptidase A no 0.49
    16 Psyr_2312 Protein of unknown function DUF24 no 0.49
    17 Psyr_3346 conserved hypothetical protein no 0.49
    18 Psyr_4873 Molybdenum-pterin binding protein no 0.48
    19 Psyr_2218 Beta-lactamase-like protein no 0.48
    20 Psyr_1799 Protein of unknown function DUF6 no 0.48

    Or look for negative cofitness