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  • Top cofit genes for Psyr_2329 from Pseudomonas syringae pv. syringae B728a

    extracellular solute-binding protein, family 1
    SEED: Spermidine/putrescine-binding periplasmic protein
    KEGG: putative spermidine/putrescine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1168 nucleoside ABC transporter membrane protein no 0.37
    2 Psyr_2169 transcriptional regulator, MerR family no 0.35
    3 Psyr_2333 Binding-protein-dependent transport systems inner membrane component 0.35 0.32
    4 Psyr_2123 protocatechuate 3,4-dioxygenase, alpha subunit no 0.31
    5 Psyr_0115 membrane protein, putative no 0.31
    6 Psyr_1508 Phage integrase:Phage integrase, N-terminal SAM-like protein 0.37 0.31
    7 Psyr_4697 Aminoglycoside phosphotransferase no 0.30
    8 Psyr_3097 Peptidase U32 no 0.30
    9 Psyr_2497 lipoprotein, putative no 0.29
    10 Psyr_0855 conserved hypothetical protein 0.20 0.29
    11 Psyr_1465 conserved hypothetical protein no 0.29
    12 Psyr_0133 transcriptional regulator, AsnC family no 0.28
    13 Psyr_4153 conserved hypothetical protein no 0.28
    14 Psyr_3683 NLP/P60 0.23 0.27
    15 Psyr_2711 diguanylate cyclase/phosphodiesterase no 0.27
    16 Psyr_1632 ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2 0.21 0.27
    17 Psyr_2686 carbamate kinase 0.22 0.27
    18 Psyr_3384 lipoprotein, putative no 0.27
    19 Psyr_4848 SdiA-regulated no 0.27
    20 Psyr_0674 Protein of unknown function UPF0029 0.21 0.27

    Or look for negative cofitness