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  • Top cofit genes for Psyr_2287 from Pseudomonas syringae pv. syringae B728a

    outer membrane transport energization protein TonB
    SEED: Ferric siderophore transport system, periplasmic binding protein TonB
    KEGG: periplasmic protein TonB

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3083 RND efflux system, outer membrane lipoprotein, NodT no 0.50
    2 Psyr_0587 Radical SAM no 0.48
    3 Psyr_3712 conserved hypothetical protein no 0.47
    4 Psyr_2334 Binding-protein-dependent transport systems inner membrane component no 0.47
    5 Psyr_3882 conserved hypothetical protein no 0.46
    6 Psyr_0797 type II secretion system protein no 0.45
    7 Psyr_3010 nicotinamide-nucleotide adenylyltransferase, putative no 0.44
    8 Psyr_3804 ATP-dependent DNA helicase, RecQ-like protein no 0.44
    9 Psyr_5114 hypothetical protein no 0.43
    10 Psyr_2632 virulence protein SrfB no 0.43
    11 Psyr_3830 3-oxoacyl-[acyl-carrier protein] synthase no 0.43
    12 Psyr_1460 hypothetical protein no 0.43
    13 Psyr_4218 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer no 0.43
    14 Psyr_1629 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal no 0.42
    15 Psyr_1919 hypothetical protein no 0.42
    16 Psyr_1301 Protein of unknown function DUF533 no 0.42
    17 Psyr_4884 Rhodanese-like protein no 0.42
    18 Psyr_1607 transcriptional regulator, GntR family no 0.42
    19 Psyr_2428 GCN5-related N-acetyltransferase no 0.42
    20 Psyr_3935 Short-chain dehydrogenase/reductase SDR no 0.42

    Or look for negative cofitness