• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Top cofit genes for Psyr_2283 from Pseudomonas syringae pv. syringae B728a

    Secretion protein HlyD
    SEED: RND efflux system, membrane fusion protein CmeA

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2282 Hydrophobe/amphiphile efflux-1 HAE1 0.89 0.87
    2 Psyr_4819 conserved hypothetical protein 0.69 0.41
    3 Psyr_4009 RND efflux system, outer membrane lipoprotein, NodT 0.97 0.39
    4 Psyr_1268 extracellular solute-binding protein, family 3:SLT 0.47 0.33
    5 Psyr_2226 formyltetrahydrofolate deformylase no 0.33
    6 Psyr_1543 Peptidase M48, Ste24p 0.54 0.32
    7 Psyr_4208 heme catalase/peroxidase 0.37 0.32
    8 Psyr_1981 PAS:GGDEF no 0.30
    9 Psyr_1105 TonB-dependent hemoglobin/transferrin/lactoferrin receptor:TonB-dependent heme/hemoglobin receptor 0.20 0.30
    10 Psyr_1939 PAS no 0.29
    11 Psyr_1978 Thioesterase superfamily no 0.29
    12 Psyr_4577 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp no 0.29
    13 Psyr_2472 transcriptional regulator, MerR family no 0.29
    14 Psyr_2688 conserved hypothetical protein no 0.28
    15 Psyr_0222 DNA replication and repair protein RadC no 0.28
    16 Psyr_2487 Short-chain dehydrogenase/reductase SDR no 0.28
    17 Psyr_1979 tRNA-U20a,U20b-dihydrouridine synthase no 0.27
    18 Psyr_0541 Small multidrug resistance protein 0.65 0.27
    19 Psyr_1584 Aspartyl/Asparaginyl beta-hydroxylase no 0.27
    20 Psyr_3660 conserved hypothetical protein no 0.27

    Or look for negative cofitness