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  • Top cofit genes for Psyr_2228 from Pseudomonas syringae pv. syringae B728a

    conserved hypothetical protein
    SEED: Additional periplasmic component NikK of nickel ECF transporter
    KEGG: nickel transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3545 Short-chain dehydrogenase/reductase SDR no 0.47
    2 Psyr_3195 NolW-like protein no 0.46
    3 Psyr_3777 conserved hypothetical protein no 0.46
    4 Psyr_0033 tryptophan synthase, alpha chain no 0.45
    5 Psyr_0034 tryptophan synthase, beta chain no 0.43
    6 Psyr_3938 Amidase no 0.43
    7 Psyr_3877 Succinylglutamate desuccinylase/aspartoacylase no 0.42
    8 Psyr_2223 sarcosine oxidase, delta subunit no 0.41
    9 Psyr_3049 Pirin, N-terminal 0.33 0.41
    10 Psyr_0385 phosphoribosyl-ATP pyrophosphatase no 0.41
    11 Psyr_3103 phosphate ABC transporter ATP-binding protein, PhoT family no 0.41
    12 Psyr_1064 Protein of unknown function DUF328 no 0.39
    13 Psyr_1448 conserved hypothetical protein 0.35 0.38
    14 Psyr_2179 General substrate transporter:Major facilitator superfamily no 0.37
    15 Psyr_4134 ATP phosphoribosyltransferase (homohexameric) no 0.37
    16 Psyr_2965 amino acid ABC transporter ATP-binding protein, PAAT family no 0.37
    17 Psyr_2315 methyl-accepting chemotaxis sensory transducer 0.51 0.36
    18 Psyr_2543 conserved hypothetical protein no 0.36
    19 Psyr_2358 acetylornithine aminotransferase apoenzyme no 0.36
    20 Psyr_2865 Hydrophobe/amphiphile efflux-1 HAE1 no 0.36

    Or look for negative cofitness