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  • Top cofit genes for Psyr_2152 from Pseudomonas syringae pv. syringae B728a

    monosaccharide ABC transporter ATP-binding protein, CUT2 family
    SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
    KEGG: ribose transport system ATP-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4515 hypothetical protein 0.34 0.38
    2 Psyr_3698 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt 0.32 0.38
    3 Psyr_4733 betaine aldehyde dehydrogenase 0.40 0.36
    4 Psyr_0736 umuC protein no 0.35
    5 Psyr_0884 conserved hypothetical protein no 0.34
    6 Psyr_3827 ABC transporter, transmembrane region:ABC transporter 0.18 0.34
    7 Psyr_2081 conserved hypothetical protein no 0.34
    8 Psyr_2303 UbiA prenyltransferase no 0.34
    9 Psyr_2559 hypothetical protein no 0.33
    10 Psyr_2897 regulatory protein, LuxR:Response regulator receiver 0.28 0.33
    11 Psyr_1794 Amino acid adenylation no 0.33
    12 Psyr_3621 conserved hypothetical protein no 0.33
    13 Psyr_2923 Carbohydrate kinase, PfkB no 0.33
    14 Psyr_2685 ornithine carbamoyltransferase no 0.32
    15 Psyr_0103 conserved hypothetical protein no 0.32
    16 Psyr_2521 conserved hypothetical protein no 0.32
    17 Psyr_2431 Zinc-containing alcohol dehydrogenase superfamily no 0.32
    18 Psyr_4160 Maf-like protein 0.44 0.31
    19 Psyr_2335 ABC transporter no 0.31
    20 Psyr_3262 dnaK suppressor protein, putative 0.61 0.31

    Or look for negative cofitness