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Cofit
Protein
Homologs
Top cofit genes for Psyr_2115 from
Pseudomonas syringae pv. syringae B728a
Response regulator receiver
SEED: response regulator
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_3035
Glycoside hydrolase, family 3, N-terminal:Glycoside hydrolase, family 3, C-terminal:Glycoside hydrolase, family 3, C-terminal
no
0.35
2
Psyr
_3535
conserved hypothetical protein
no
0.33
3
Psyr
_3933
conserved hypothetical protein
no
0.32
4
Psyr
_0469
dihydroxyacid dehydratase
0.68
0.32
5
Psyr
_3858
Nucleoside-specific channel-forming protein, Tsx
no
0.32
6
Psyr
_0847
acetolactate synthase, small subunit
no
0.31
7
Psyr
_0386
phosphoribosyl-AMP cyclohydrolase
0.66
0.31
8
Psyr
_1266
Twin-arginine translocation pathway signal
no
0.31
9
Psyr
_3688
conserved hypothetical protein
no
0.31
10
Psyr
_0639
lipoprotein, putative
no
0.30
11
Psyr
_4852
D-3-phosphoglycerate dehydrogenase
0.69
0.30
12
Psyr
_3174
uroporphyrinogen-III C-methyltransferase / precorrin-2 dehydrogenase
0.67
0.30
13
Psyr
_0385
phosphoribosyl-ATP pyrophosphatase
0.67
0.30
14
Psyr
_0557
phosphoserine phosphatase
0.66
0.30
15
Psyr
_2077
regulatory protein, LysR:LysR, substrate-binding protein
no
0.30
16
Psyr
_4897
imidazoleglycerol-phosphate dehydratase
0.67
0.29
17
Psyr
_0846
acetolactate synthase, large subunit
0.68
0.29
18
Psyr
_0675
transcriptional regulator, TetR family
no
0.29
19
Psyr
_1269
phosphoribosylformylglycinamidine synthase
no
0.29
20
Psyr
_2108
23S rRNA m(2)G-2445 methyltransferase
no
0.29
Or look for
negative cofitness