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  • Top cofit genes for Psyr_2105 from Pseudomonas syringae pv. syringae B728a

    conserved hypothetical protein
    SEED: Nitrate ABC transporter, nitrate-binding protein
    KEGG: sulfonate/nitrate/taurine transport system substrate-binding protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2294 conserved hypothetical protein 0.34 0.33
    2 Psyr_1794 Amino acid adenylation no 0.32
    3 Psyr_1757 Binding-protein-dependent transport systems inner membrane component 0.17 0.31
    4 Psyr_3756 Na+/solute symporter 0.26 0.30
    5 Psyr_2577 Amino acid adenylation 0.53 0.29
    6 Psyr_4277 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region no 0.29
    7 Psyr_1050 conserved hypothetical protein 0.42 0.28
    8 Psyr_4395 type II secretion system protein no 0.28
    9 Psyr_3872 conserved hypothetical protein no 0.27
    10 Psyr_1493 Twin-arginine translocation pathway signal:Copper-resistance protein CopA 0.20 0.26
    11 Psyr_5080 Cyclopropane-fatty-acyl-phospholipid synthase no 0.26
    12 Psyr_1163 Isochorismatase hydrolase no 0.26
    13 Psyr_2408 3-oxoadipate enol-lactonase no 0.26
    14 Psyr_2593 ABC transporter 0.49 0.25
    15 Psyr_1220 type III effector HopX1 no 0.25
    16 Psyr_0232 gamma-glutamylputrescine oxidase 0.47 0.25
    17 Psyr_4949 conserved hypothetical protein no 0.25
    18 Psyr_1066 PhoH-like protein 0.26 0.25
    19 Psyr_2560 hypothetical protein no 0.24
    20 Psyr_0513 amino acid ABC transporter substrate-binding protein, PAAT family no 0.24

    Or look for negative cofitness