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  • Top cofit genes for Psyr_2095 from Pseudomonas syringae pv. syringae B728a

    Conserved TM helix
    SEED: CmpX

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4118 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal 0.31 0.42
    2 Psyr_4683 dethiobiotin synthase 0.40 0.40
    3 Psyr_0738 type III effector protein AvrRpm1 no 0.39
    4 Psyr_1613 septum site-determining protein MinC 0.74 0.38
    5 Psyr_1219 type III effector protein AvrB3 no 0.38
    6 Psyr_4933 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase no 0.37
    7 Psyr_4686 8-amino-7-oxononanoate synthase 0.42 0.37
    8 Psyr_4093 glutamate N-acetyltransferase 0.45 0.35
    9 Psyr_2601 regulatory protein, LuxR no 0.35
    10 Psyr_1929 hypothetical protein no 0.35
    11 Psyr_0122 NAD(P)H dehydrogenase (quinone) no 0.35
    12 Psyr_0454 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme 0.40 0.34
    13 Psyr_1102 conserved hypothetical protein no 0.33
    14 Psyr_3089 Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein no 0.32
    15 Psyr_4381 arginine decarboxylase no 0.32
    16 Psyr_3408 Outer membrane autotransporter barrel no 0.32
    17 Psyr_1486 Cl- channel, voltage gated no 0.32
    18 Psyr_0312 hypothetical protein no 0.31
    19 Psyr_2322 YD repeat protein no 0.31
    20 Psyr_0763 Porin, LamB type 0.41 0.31

    Or look for negative cofitness