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  • Top cofit genes for Psyr_2088 from Pseudomonas syringae pv. syringae B728a

    2-methylaconitate cis-trans isomerase
    SEED: 2-methylaconitate cis-trans isomerase
    KEGG: hypothetical protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0034 tryptophan synthase, beta chain 0.67 0.49
    2 Psyr_4418 Precorrin-6Y C5,15-methyltransferase (decarboxylating) no 0.47
    3 Psyr_1511 type II secretion system protein E no 0.46
    4 Psyr_2719 transcriptional regulator, TetR family 0.42 0.46
    5 Psyr_0033 tryptophan synthase, alpha chain 0.51 0.44
    6 Psyr_1126 Heavy metal sensor kinase no 0.43
    7 Psyr_3419 4Fe-4S ferredoxin, iron-sulfur binding protein 0.26 0.42
    8 Psyr_3015 cobaltochelatase CobN subunit 0.82 0.41
    9 Psyr_0676 Xanthine/uracil permease family no 0.41
    10 Psyr_0032 conserved hypothetical protein no 0.41
    11 Psyr_0835 transcriptional regulator, TraR/DksA family 0.69 0.41
    12 Psyr_0161 Protein of unknown function DUF861 no 0.41
    13 Psyr_1304 CheW-like protein no 0.40
    14 Psyr_3773 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal no 0.40
    15 Psyr_2328 sodium/proton antiporter, CPA1 family no 0.40
    16 Psyr_3370 Protein of unknown function DUF451 no 0.40
    17 Psyr_1269 phosphoribosylformylglycinamidine synthase 0.88 0.39
    18 Psyr_1121 6-phosphogluconolactonase 0.51 0.39
    19 Psyr_0667 Periplasmic binding protein no 0.39
    20 Psyr_2324 conserved hypothetical protein no 0.39

    Or look for negative cofitness