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Cofit
Protein
Homologs
Top cofit genes for Psyr_2076 from
Pseudomonas syringae pv. syringae B728a
UspA
SEED: Universal stress protein family
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_4693
Binding-protein-dependent transport systems inner membrane component
no
0.37
2
Psyr
_1422
Protein of unknown function DUF1528:Relaxase
no
0.33
3
Psyr
_3662
NAD(P)H dehydrogenase (quinone)
no
0.33
4
Psyr
_0995
Flavin reductase-like protein
no
0.32
5
Psyr
_2037
Fimbrial biogenesis outer membrane usher protein
no
0.31
6
Psyr
_2958
extracellular solute-binding protein, family 5
no
0.30
7
Psyr
_3673
Phosphoglycerate/bisphosphoglycerate mutase
no
0.30
8
Psyr
_5055
YeeE/YedE
no
0.30
9
Psyr
_1988
2-keto-3-deoxy-phosphogalactonate aldolase
no
0.29
10
Psyr
_3435
chemotaxis phosphatase, CheZ
no
0.29
11
Psyr
_4491
Deoxyribose-phosphate aldolase
no
0.29
12
Psyr
_5036
Response regulator receiver
0.36
0.28
13
Psyr
_3805
hypothetical protein
no
0.28
14
Psyr
_0400
nuclease (SNase-like)
no
0.28
15
Psyr
_4681
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region
0.54
0.28
16
Psyr
_4014
regulatory protein, IclR
0.47
0.27
17
Psyr
_2635
conserved hypothetical protein
no
0.27
18
Psyr
_1321
conserved hypothetical protein
0.47
0.27
19
Psyr
_3225
Protein-tyrosine kinase
no
0.27
20
Psyr
_3666
Protein of unknown function DUF195
no
0.26
Or look for
negative cofitness