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  • Top cofit genes for Psyr_2000 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, GntR family
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4044 Phospholipase D/Transphosphatidylase 0.66 0.47
    2 Psyr_1614 lipid A biosynthesis acyltransferase no 0.44
    3 Psyr_0595 Nicotinate phosphoribosyltransferase 0.28 0.44
    4 Psyr_4943 Peptidoglycan-binding LysM:Transport-associated no 0.43
    5 Psyr_3300 Conserved hypothetical protein 147 no 0.42
    6 Psyr_3985 Pectate lyase/Amb allergen no 0.41
    7 Psyr_2424 Integral membrane protein TerC no 0.41
    8 Psyr_4175 Transport-associated protein no 0.40
    9 Psyr_0981 conserved hypothetical protein 0.28 0.40
    10 Psyr_3270 AP endonuclease, family 2 no 0.39
    11 Psyr_2692 Polysaccharide deacetylase 0.72 0.39
    12 Psyr_4144 Protein of unknown function DUF1239 no 0.39
    13 Psyr_0903 outer membrane porin 0.30 0.39
    14 Psyr_0014 lipid A biosynthesis acyltransferase 0.22 0.38
    15 Psyr_4197 DNA replication and repair protein RecN 0.18 0.38
    16 Psyr_4224 conserved hypothetical protein no 0.38
    17 Psyr_0015 Oxidoreductase alpha (molybdopterin) subunit no 0.38
    18 Psyr_3495 ATP-binding region, ATPase-like protein no 0.37
    19 Psyr_4140 Protein of unknown function DUF140 no 0.36
    20 Psyr_1715 Exodeoxyribonuclease I subunit D 0.22 0.36

    Or look for negative cofitness