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  • Top cofit genes for Psyr_1982 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, LysR family
    SEED: Cys regulon transcriptional activator CysB

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2421 Major facilitator superfamily no 0.45
    2 Psyr_3655 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) no 0.43
    3 Psyr_4770 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) no 0.42
    4 Psyr_1662 tRNA pseudouridine synthase no 0.42
    5 Psyr_0827 pantothenate synthetase 0.22 0.38
    6 Psyr_0030 transcriptional regulator, LysR family 0.44 0.37
    7 Psyr_1542 quinolinate synthetase no 0.36
    8 Psyr_4959 conserved hypothetical protein no 0.35
    9 Psyr_0478 pilus retraction ATPase PilT 0.40 0.35
    10 Psyr_5053 asparaginase 0.13 0.33
    11 Psyr_4369 glutamate-5-semialdehyde dehydrogenase no 0.33
    12 Psyr_0917 ABC-2 no 0.32
    13 Psyr_2436 Mannitol dehydrogenase 0.64 0.32
    14 Psyr_5061 acetyl-CoA carboxylase carboxyltransferase subunit alpha / biotin carboxylase 0.19 0.32
    15 Psyr_0704 glutamate 5-kinase 0.34 0.31
    16 Psyr_0650 Protein of unknown function RIO1 no 0.31
    17 Psyr_0064 Sensory transduction protein kinase AlgZ 0.42 0.31
    18 Psyr_4940 3'(2'),5'-bisphosphate nucleotidase 0.39 0.31
    19 Psyr_0597 amino acid/amide ABC transporter substrate-binding protein, HAAT family no 0.31
    20 Psyr_1663 phosphoribosylanthranilate isomerase 0.36 0.31

    Or look for negative cofitness