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Cofit
Protein
Homologs
Top cofit genes for Psyr_1981 from
Pseudomonas syringae pv. syringae B728a
PAS:GGDEF
SEED: Sensory box protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_0014
lipid A biosynthesis acyltransferase
no
0.32
2
Psyr
_2000
transcriptional regulator, GntR family
no
0.31
3
Psyr
_4175
Transport-associated protein
no
0.31
4
Psyr
_2283
Secretion protein HlyD
no
0.30
5
Psyr
_3181
Arginyltransferase
no
0.30
6
Psyr
_0997
Endoribonuclease L-PSP
no
0.27
7
Psyr
_1618
Dihydrodipicolinate synthetase
no
0.27
8
Psyr
_3300
Conserved hypothetical protein 147
no
0.27
9
Psyr
_3270
AP endonuclease, family 2
no
0.27
10
Psyr
_0140
Binding-protein-dependent transport systems inner membrane component
no
0.27
11
Psyr
_2282
Hydrophobe/amphiphile efflux-1 HAE1
no
0.27
12
Psyr
_0978
lipoprotein, putative
no
0.26
13
Psyr
_0675
transcriptional regulator, TetR family
no
0.26
14
Psyr
_4943
Peptidoglycan-binding LysM:Transport-associated
no
0.26
15
Psyr
_0595
Nicotinate phosphoribosyltransferase
no
0.26
16
Psyr
_0234
transcriptional regulator, AsnC family
no
0.26
17
Psyr
_0324
transcriptional regulator, AraC family
no
0.25
18
Psyr
_4501
transcriptional regulator, MarR family
no
0.25
19
Psyr
_4578
conserved hypothetical protein
no
0.25
20
Psyr
_1721
moxR protein, putative
no
0.25
Or look for
negative cofitness