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  • Top cofit genes for Psyr_1971 from Pseudomonas syringae pv. syringae B728a

    Peptidase S45, penicillin amidase
    SEED: Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_5000 conserved hypothetical protein no 0.41
    2 Psyr_4594 conserved hypothetical protein no 0.39
    3 Psyr_4088 ketopantoate reductase no 0.38
    4 Psyr_1125 GGDEF domain protein no 0.36
    5 Psyr_1134 pili assembly chaperone no 0.35
    6 Psyr_2492 Outer membrane autotransporter barrel no 0.35
    7 Psyr_0255 glutamate-cysteine ligase no 0.35
    8 Psyr_3167 Citrate-proton symport no 0.35
    9 Psyr_4484 hypothetical protein no 0.34
    10 Psyr_4202 Sodium:neurotransmitter symporter no 0.34
    11 Psyr_3846 L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein no 0.34
    12 Psyr_0880 MltA:3D no 0.34
    13 Psyr_2530 General substrate transporter:Major facilitator superfamily no 0.33
    14 Psyr_0862 Acyltransferase 3 no 0.32
    15 Psyr_3528 hypothetical protein no 0.32
    16 Psyr_4519 General substrate transporter:Major facilitator superfamily no 0.32
    17 Psyr_1654 Type IV pilus assembly PilZ no 0.32
    18 Psyr_0660 transcriptional regulator, ArsR family 0.53 0.32
    19 Psyr_4583 Glycoside hydrolase, family 19 no 0.31
    20 Psyr_3670 Glutathione peroxidase no 0.31

    Or look for negative cofitness