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  • Top cofit genes for Psyr_1916 from Pseudomonas syringae pv. syringae B728a

    Peptidase S24, S26A and S26B
    SEED: Error-prone repair protein UmuD
    KEGG: DNA polymerase V

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4450 transcriptional regulator, TetR family no 0.53
    2 Psyr_0516 ATP-dependent RNA helicase DbpA no 0.50
    3 Psyr_1605 conserved hypothetical protein no 0.48
    4 Psyr_2647 hypothetical protein no 0.48
    5 Psyr_3494 hypothetical protein no 0.48
    6 Psyr_4578 conserved hypothetical protein no 0.47
    7 Psyr_2918 3-hydroxyacyl-CoA dehydrogenase, C-terminal:3-hydroxyacyl-CoA dehydrogenase, NAD-binding protein no 0.46
    8 Psyr_2713 transcriptional regulator, LysR family no 0.46
    9 Psyr_1975 Integrase, catalytic region no 0.45
    10 Psyr_4480 outer membrane transport energization protein TonB no 0.45
    11 Psyr_5074 conserved hypothetical protein no 0.44
    12 Psyr_2570 monosaccharide ABC transporter membrane protein, CUT2 family no 0.43
    13 Psyr_1895 conserved hypothetical protein no 0.42
    14 Psyr_0599 amino acid/amide ABC transporter membrane protein 2, HAAT family no 0.42
    15 Psyr_0248 conserved hypothetical protein no 0.42
    16 Psyr_2651 conserved hypothetical protein no 0.42
    17 Psyr_2083 Protein of unknown function DUF785 no 0.41
    18 Psyr_0252 adenylate cyclase no 0.41
    19 Psyr_2272 Helix-turn-helix motif protein no 0.41
    20 Psyr_4168 K+-dependent Na+/Ca+ exchanger related-protein no 0.41

    Or look for negative cofitness