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  • Top cofit genes for Psyr_1915 from Pseudomonas syringae pv. syringae B728a

    Peptidase M20:Peptidase M20
    SEED: Glutamate carboxypeptidase (EC 3.4.17.11)
    KEGG: glutamate carboxypeptidase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1542 quinolinate synthetase 0.52 0.46
    2 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.41 0.41
    3 Psyr_1119 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) no 0.39
    4 Psyr_3959 L-aspartate oxidase no 0.39
    5 Psyr_2722 LamB/YcsF no 0.39
    6 Psyr_0815 nicotinate-nucleotide pyrophosphorylase (carboxylating) 0.39 0.37
    7 Psyr_3615 Aminotransferase, class I and II 0.42 0.37
    8 Psyr_0459 5,10-methylenetetrahydrofolate reductase no 0.37
    9 Psyr_4277 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region no 0.36
    10 Psyr_2970 TPR repeat protein:TPR repeat protein no 0.36
    11 Psyr_4133 histidinol dehydrogenase no 0.35
    12 Psyr_4894 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase no 0.35
    13 Psyr_0544 hydroxymethylpyrimidine synthase 0.38 0.35
    14 Psyr_4134 ATP phosphoribosyltransferase (homohexameric) no 0.35
    15 Psyr_4896 imidazole glycerol phosphate synthase subunit hisH no 0.35
    16 Psyr_0473 Methionine biosynthesis MetW 0.36 0.34
    17 Psyr_3344 conserved hypothetical protein no 0.34
    18 Psyr_4897 imidazoleglycerol-phosphate dehydratase no 0.34
    19 Psyr_0848 ketol-acid reductoisomerase no 0.33
    20 Psyr_0208 endoribonuclease L-PSP no 0.33

    Or look for negative cofitness