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  • Top cofit genes for Psyr_1889 from Pseudomonas syringae pv. syringae B728a

    type III effector HopH1

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4341 thiamine-phosphate diphosphorylase no 0.48
    2 Psyr_4315 Asparagine synthase, glutamine-hydrolyzing no 0.47
    3 Psyr_0938 hypothetical protein 0.49 0.47
    4 Psyr_2065 transcription elongation factor GreB no 0.47
    5 Psyr_4313 Beta-ketoacyl synthase:Beta-ketoacyl synthase:Phosphopantetheine-binding protein no 0.46
    6 Psyr_2460 inner membrane peptidase, Serine peptidase, MEROPS family S49 no 0.45
    7 Psyr_4381 arginine decarboxylase 0.44 0.45
    8 Psyr_4740 thiazole-phosphate synthase no 0.45
    9 Psyr_1204 hypothetical protein no 0.44
    10 Psyr_1930 hypothetical protein no 0.44
    11 Psyr_4340 phosphomethylpyrimidine kinase, putative no 0.44
    12 Psyr_4933 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase no 0.44
    13 Psyr_4996 hypothetical protein 0.44 0.44
    14 Psyr_3904 Major intrinsic protein no 0.43
    15 Psyr_2629 von Willebrand factor, type A no 0.43
    16 Psyr_3776 Cytosine deaminase no 0.42
    17 Psyr_3089 Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein 0.46 0.42
    18 Psyr_4033 YD repeat protein no 0.42
    19 Psyr_1544 SirA-like protein no 0.42
    20 Psyr_4683 dethiobiotin synthase no 0.42

    Or look for negative cofitness