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  • Top cofit genes for Psyr_1886 from Pseudomonas syringae pv. syringae B728a

    Hemolysin-type calcium-binding region
    SEED: Hemolysin-type calcium-binding region

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0331 AMP-dependent synthetase and ligase no 0.51
    2 Psyr_0379 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer no 0.43
    3 Psyr_0110 hypothetical protein no 0.41
    4 Psyr_3410 hypothetical protein no 0.40
    5 Psyr_4805 YD repeat protein no 0.40
    6 Psyr_3874 amino acid ABC transporter substrate-binding protein, PAAT family no 0.40
    7 Psyr_4812 sorbitol-binding protein / mannitol-binding protein no 0.40
    8 Psyr_0503 conserved domain protein no 0.40
    9 Psyr_0123 Short-chain dehydrogenase/reductase SDR no 0.39
    10 Psyr_3123 type III effector HopAH2 no 0.39
    11 Psyr_0487 glutathione synthase no 0.39
    12 Psyr_1920 carboxyphosphonoenolpyruvate phosphonomutase-like protein no 0.39
    13 Psyr_2080 aminodeoxychorismate synthase, subunit I no 0.39
    14 Psyr_4216 regulatory protein, LuxR no 0.39
    15 Psyr_3542 Short-chain dehydrogenase/reductase SDR no 0.38
    16 Psyr_3592 Nitroreductase no 0.37
    17 Psyr_0098 Protein of unknown function DUF87 no 0.37
    18 Psyr_1225 hypothetical protein no 0.37
    19 Psyr_0109 hypothetical protein no 0.37
    20 Psyr_0418 conserved domain protein no 0.37

    Or look for negative cofitness