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  • Top cofit genes for Psyr_1858 from Pseudomonas syringae pv. syringae B728a

    transcriptional regulator, LuxR family
    SEED: DNA-binding HTH domain-containing proteins

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1824 amino acid ABC transporter substrate-binding protein, PAAT family no 0.39
    2 Psyr_1703 Fatty acid desaturase no 0.37
    3 Psyr_5016 Alanine dehydrogenase/PNT, C-terminal:Alanine dehydrogenase/PNT, N-terminal no 0.36
    4 Psyr_3837 conserved hypothetical protein no 0.36
    5 Psyr_1271 ErfK/YbiS/YcfS/YnhG no 0.34
    6 Psyr_3523 Peptidase M20D, amidohydrolase no 0.34
    7 Psyr_1275 Protein of unknown function DUF1289 no 0.33
    8 Psyr_2380 hypothetical protein no 0.32
    9 Psyr_3536 hypothetical protein no 0.32
    10 Psyr_4991 hypothetical protein no 0.32
    11 Psyr_4671 coenzyme PQQ synthesis protein B no 0.31
    12 Psyr_3105 phosphate ABC transporter membrane protein 1, PhoT family no 0.30
    13 Psyr_4769 Major facilitator superfamily no 0.30
    14 Psyr_2496 lipopolysaccharide core biosynthesis domain protein no 0.30
    15 Psyr_4922 Short-chain dehydrogenase/reductase SDR no 0.30
    16 Psyr_4173 Protein of unknown function DUF748 no 0.30
    17 Psyr_0550 Protein of unknown function UPF0227 no 0.29
    18 Psyr_0189 ammonium transporter no 0.29
    19 Psyr_2614 Amino acid adenylation no 0.29
    20 Psyr_4836 N-formylglutamate deformylase no 0.29

    Or look for negative cofitness