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  • Top cofit genes for Psyr_1715 from Pseudomonas syringae pv. syringae B728a

    Exodeoxyribonuclease I subunit D
    SEED: Exonuclease SbcD
    KEGG: exonuclease SbcD

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3195 NolW-like protein no 0.45
    2 Psyr_2524 conserved hypothetical protein no 0.44
    3 Psyr_4882 protein translocase subunit secB 0.43 0.42
    4 Psyr_4158 conserved hypothetical protein 0.42 0.42
    5 Psyr_3601 conserved hypothetical protein no 0.40
    6 Psyr_1733 Peptidyl-prolyl cis-trans isomerase, cyclophilin type no 0.40
    7 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) no 0.39
    8 Psyr_1064 Protein of unknown function DUF328 0.71 0.39
    9 Psyr_3690 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.19 0.39
    10 Psyr_4441 heat shock protein YegD 0.20 0.38
    11 Psyr_1274 transferase hexapeptide repeat protein no 0.38
    12 Psyr_3675 adenosylcobinamide kinase 0.46 0.38
    13 Psyr_0929 Glycosyl transferase, family 2 no 0.37
    14 Psyr_0576 ATP phosphoribosyltransferase regulatory subunit, putative no 0.37
    15 Psyr_2443 conserved domain protein no 0.37
    16 Psyr_5067 conserved hypothetical protein no 0.37
    17 Psyr_1737 carbohydrate ABC transporter ATP-binding protein, CUT1 family no 0.36
    18 Psyr_3545 Short-chain dehydrogenase/reductase SDR no 0.36
    19 Psyr_3270 AP endonuclease, family 2 no 0.36
    20 Psyr_2340 Peptidylprolyl isomerase, FKBP-type 0.19 0.36

    Or look for negative cofitness