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  • Top cofit genes for Psyr_1684 from Pseudomonas syringae pv. syringae B728a

    GGDEF domain protein
    SEED: FOG: GGDEF domain

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4377 response regulator receiver modulated diguanylate cyclase 0.45 0.78
    2 Psyr_3309 membrane protein, putative no 0.71
    3 Psyr_3301 Undecaprenyl-phosphate galactosephosphotransferase no 0.67
    4 Psyr_3303 Polysaccharide export protein no 0.66
    5 Psyr_4678 GGDEF domain protein no 0.66
    6 Psyr_3443 Flagellar biosynthesis protein FliQ no 0.60
    7 Psyr_3304 Lipopolysaccharide biosynthesis no 0.60
    8 Psyr_0200 conserved hypothetical protein no 0.59
    9 Psyr_4206 GGDEF domain protein no 0.59
    10 Psyr_3458 Flagellar hook-basal body complex protein FliE no 0.58
    11 Psyr_2138 Glycosyl transferase, family 2 no 0.56
    12 Psyr_0561 chemotaxis motA protein 0.86 0.55
    13 Psyr_3447 Flagellar motor switch protein FliM no 0.55
    14 Psyr_3893 OmpA/MotB 0.83 0.53
    15 Psyr_3470 Flagellin, N-terminal no 0.53
    16 Psyr_3474 Flagellar L-ring protein no 0.53
    17 Psyr_3478 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE no 0.52
    18 Psyr_3441 Flagellar biosynthetic protein FlhB no 0.51
    19 Psyr_3454 ATPase FliI/YscN no 0.50
    20 Psyr_3307 Glycosyl transferase, group 1 no 0.50

    Or look for negative cofitness