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  • Top cofit genes for Psyr_1654 from Pseudomonas syringae pv. syringae B728a

    Type IV pilus assembly PilZ
    SEED: Type IV pilus biogenesis protein PilZ
    KEGG: type IV pilus assembly protein PilZ

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4339 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase 0.52 0.50
    2 Psyr_0719 type IV pilus-associated protein, putative 0.72 0.48
    3 Psyr_4519 General substrate transporter:Major facilitator superfamily no 0.47
    4 Psyr_0558 conserved hypothetical protein 0.94 0.45
    5 Psyr_3489 FlgN no 0.44
    6 Psyr_0799 Fimbrial protein pilin 0.67 0.44
    7 Psyr_3960 conserved hypothetical protein no 0.44
    8 Psyr_1887 CDS no 0.40
    9 Psyr_3726 conserved hypothetical protein no 0.40
    10 Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS no 0.40
    11 Psyr_4594 conserved hypothetical protein no 0.39
    12 Psyr_3441 Flagellar biosynthetic protein FlhB 0.57 0.38
    13 Psyr_0255 glutamate-cysteine ligase no 0.38
    14 Psyr_0862 Acyltransferase 3 no 0.38
    15 Psyr_0364 sodium/proton antiporter, NhaA family no 0.38
    16 Psyr_3665 conserved hypothetical protein no 0.38
    17 Psyr_4510 hypothetical protein no 0.38
    18 Psyr_5081 Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase no 0.37
    19 Psyr_3437 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG 0.56 0.37
    20 Psyr_0717 type IV pilus assembly protein PilW no 0.37

    Or look for negative cofitness