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  • Top cofit genes for Psyr_1638 from Pseudomonas syringae pv. syringae B728a

    RNAse E
    SEED: Ribonuclease E (EC 3.1.26.12)
    KEGG: ribonuclease E

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_3867 hypothetical protein no 0.42
    2 Psyr_3882 conserved hypothetical protein no 0.41
    3 Psyr_4136 BolA-like protein no 0.39
    4 Psyr_3790 conserved hypothetical protein no 0.38
    5 Psyr_4077 Methylated-DNA-[protein]-cysteine S-methyltransferase no 0.38
    6 Psyr_2267 extracellular solute-binding protein, family 5 no 0.37
    7 Psyr_4045 YceI no 0.37
    8 Psyr_3830 3-oxoacyl-[acyl-carrier protein] synthase 0.65 0.36
    9 Psyr_4801 Outer membrane efflux protein no 0.35
    10 Psyr_2296 Aldo/keto reductase no 0.35
    11 Psyr_0248 conserved hypothetical protein no 0.34
    12 Psyr_2925 Helix-turn-helix motif protein no 0.34
    13 Psyr_0857 [SSU ribosomal protein S18P]-alanine acetyltransferase no 0.34
    14 Psyr_1258 Peptidase M23B no 0.33
    15 Psyr_2212 Arginase/agmatinase/formiminoglutamase no 0.33
    16 Psyr_2713 transcriptional regulator, LysR family no 0.33
    17 Psyr_0806 conserved hypothetical protein no 0.33
    18 Psyr_3404 aconitase no 0.33
    19 Psyr_3711 Dienelactone hydrolase no 0.33
    20 Psyr_0291 DedA 0.50 0.33

    Or look for negative cofitness