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  • Top cofit genes for Psyr_1598 from Pseudomonas syringae pv. syringae B728a

    diguanylate cyclase/phosphodiesterase
    SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2040 YD repeat protein no 0.31
    2 Psyr_2628 ABC transporter no 0.28
    3 Psyr_4175 Transport-associated protein no 0.28
    4 Psyr_0516 ATP-dependent RNA helicase DbpA no 0.28
    5 Psyr_4672 Coenzyme PQQ synthesis C no 0.27
    6 Psyr_4824 ABC transporter, substrate-binding protein, aliphatic sulfonate no 0.27
    7 Psyr_4223 conserved hypothetical protein no 0.27
    8 Psyr_3914 DSBA oxidoreductase 0.26 0.27
    9 Psyr_3063 Major facilitator superfamily no 0.27
    10 Psyr_0239 cytochrome c5 0.23 0.27
    11 Psyr_3500 4-hydroxybenzoate 3-monooxygenase no 0.26
    12 Psyr_3491 Major facilitator superfamily 0.29 0.26
    13 Psyr_3104 phosphate ABC transporter membrane protein 2, PhoT family no 0.26
    14 Psyr_3696 23S rRNA m(5)U-1939 methyltransferase 0.34 0.26
    15 Psyr_5116 hypothetical protein no 0.26
    16 Psyr_3762 General substrate transporter:Major facilitator superfamily no 0.26
    17 Psyr_4019 H-NS family protein MvaT no 0.26
    18 Psyr_4801 Outer membrane efflux protein 0.34 0.25
    19 Psyr_4385 Alpha-2-macroglobulin, N-terminal:Alpha-2-macroglobulin, N-terminal 0.35 0.25
    20 Psyr_2871 CDS no 0.25

    Or look for negative cofitness