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  • Top cofit genes for Psyr_1574 from Pseudomonas syringae pv. syringae B728a

    oligopeptidase B, Serine peptidase, MEROPS family S09A
    SEED: Protease II (EC 3.4.21.83)
    KEGG: oligopeptidase B

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2277 ammonium transporter 0.26 0.43
    2 Psyr_0375 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 no 0.39
    3 Psyr_3434 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt 0.54 0.39
    4 Psyr_1998 lipoprotein, putative no 0.39
    5 Psyr_2186 Senescence marker protein-30 (SMP-30) no 0.38
    6 Psyr_4764 SAM-dependent methyltransferase no 0.36
    7 Psyr_4508 Endo-1,4-beta-xylanase no 0.36
    8 Psyr_1608 ice-nucleation proteins octamer repeat protein no 0.36
    9 Psyr_0277 ABC transporter 0.32 0.35
    10 Psyr_4245 hypothetical protein no 0.35
    11 Psyr_1376 DNA mismatch repair protein MutS no 0.35
    12 Psyr_1941 ATP-binding region, ATPase-like:Histidine kinase no 0.34
    13 Psyr_0450 Malonate/sodium symporter MadM subunit no 0.33
    14 Psyr_3480 Flagellar basal-body rod protein FlgC 0.68 0.32
    15 Psyr_5029 Rubredoxin-type Fe(Cys)4 protein no 0.32
    16 Psyr_1850 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase 0.28 0.32
    17 Psyr_3977 Urea amidolyase-related protein no 0.32
    18 Psyr_4469 conserved hypothetical protein no 0.32
    19 Psyr_1198 type III secretion protein HrpF no 0.32
    20 Psyr_0676 Xanthine/uracil permease family 0.22 0.32

    Or look for negative cofitness