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Cofit
Protein
Homologs
Top cofit genes for Psyr_1559 from
Pseudomonas syringae pv. syringae B728a
luciferase
SEED: luciferase family protein
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_1993
transcriptional regulator, AraC family
no
0.43
2
Psyr
_0432
conserved hypothetical protein
no
0.42
3
Psyr
_1080
Excinuclease ABC, C subunit, N-terminal
0.52
0.41
4
Psyr
_3404
aconitase
no
0.40
5
Psyr
_1105
TonB-dependent hemoglobin/transferrin/lactoferrin receptor:TonB-dependent heme/hemoglobin receptor
0.57
0.40
6
Psyr
_2725
Thiolase
no
0.40
7
Psyr
_2523
DNA polymerase III, alpha subunit
no
0.39
8
Psyr
_4583
Glycoside hydrolase, family 19
no
0.39
9
Psyr
_1107
Sigma-70 region 2
no
0.38
10
Psyr
_3797
NAD(P)H dehydrogenase (quinone)
no
0.38
11
Psyr
_2130
4-hydroxyphenylpyruvate dioxygenase
no
0.38
12
Psyr
_1896
transcription-repair coupling factor
no
0.38
13
Psyr
_4489
putative cytoplasmic protein
no
0.37
14
Psyr
_4171
Twin-arginine translocation pathway signal
no
0.36
15
Psyr
_2446
MCP methyltransferase, CheR-type
0.50
0.36
16
Psyr
_0781
Protein-glutamate methylesterase
no
0.36
17
Psyr
_0293
Polyphosphate kinase
no
0.35
18
Psyr
_3599
Alkanesulfonate monooxygenase
no
0.35
19
Psyr
_4630
thiosulfate sulfurtransferase
no
0.35
20
Psyr
_2296
Aldo/keto reductase
no
0.35
Or look for
negative cofitness