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  • Top cofit genes for Psyr_1541 from Pseudomonas syringae pv. syringae B728a

    DedA
    SEED: DedA family inner membrane protein YohD

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2866 Secretion protein HlyD no 0.37
    2 Psyr_2066 Protein of unknown function DUF214:Fimbrial assembly no 0.36
    3 Psyr_3249 conserved hypothetical protein no 0.34
    4 Psyr_0442 Malonate decarboxylase, alpha subunit no 0.34
    5 Psyr_3756 Na+/solute symporter no 0.34
    6 Psyr_2533 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal 0.39 0.33
    7 Psyr_2743 Lysine exporter protein (LYSE/YGGA) 0.67 0.32
    8 Psyr_1234 RNA methyltransferase TrmH, group 1 0.13 0.31
    9 Psyr_1970 Secretion protein HlyD no 0.30
    10 Psyr_2646 Radical SAM no 0.30
    11 Psyr_3575 Phenylalanine 4-hydroxylase no 0.29
    12 Psyr_0176 conserved hypothetical protein no 0.29
    13 Psyr_3142 general secretion pathway protein N, putative no 0.29
    14 Psyr_2944 amino acid ABC transporter membrane protein 1, PAAT family no 0.29
    15 Psyr_2716 Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme no 0.28
    16 Psyr_3231 sugar transferase no 0.28
    17 Psyr_2365 Radical SAM no 0.28
    18 Psyr_2017 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein no 0.28
    19 Psyr_1737 carbohydrate ABC transporter ATP-binding protein, CUT1 family no 0.28
    20 Psyr_1963 Cyclic peptide transporter 0.25 0.28

    Or look for negative cofitness