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  • Top cofit genes for Psyr_1450 from Pseudomonas syringae pv. syringae B728a

    Plasmid conserved hypothetical protein, RAQPRD
    SEED: Candidate type III effector Hop protein

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2685 ornithine carbamoyltransferase 0.29 0.33
    2 Psyr_0546 lipoprotein, putative no 0.32
    3 Psyr_2335 ABC transporter no 0.31
    4 Psyr_2081 conserved hypothetical protein no 0.31
    5 Psyr_0074 diguanylate cyclase/phosphodiesterase no 0.31
    6 Psyr_4262 lipoprotein, putative no 0.30
    7 Psyr_5007 Aldo/keto reductase no 0.30
    8 Psyr_2100 assimilatory nitrate reductase (NADH) beta subunit no 0.29
    9 Psyr_2725 Thiolase no 0.28
    10 Psyr_1422 Protein of unknown function DUF1528:Relaxase no 0.28
    11 Psyr_0680 DNA helicase/exodeoxyribonuclease V, gamma subunit 0.24 0.28
    12 Psyr_3734 Outer membrane autotransporter barrel no 0.27
    13 Psyr_0806 conserved hypothetical protein no 0.27
    14 Psyr_1596 Helix-turn-helix motif protein no 0.27
    15 Psyr_1411 4-hydroxybenzoyl-CoA thioesterase no 0.27
    16 Psyr_2753 Zinc-containing alcohol dehydrogenase superfamily no 0.27
    17 Psyr_0150 Acetylornithine deacetylase (ArgE) no 0.27
    18 Psyr_4332 conserved hypothetical protein no 0.26
    19 Psyr_4893 imidazole glycerol phosphate synthase subunit hisF no 0.26
    20 Psyr_2276 glutamate synthase (NADPH) GltB2 subunit no 0.26

    Or look for negative cofitness