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  • Top cofit genes for Psyr_1425 from Pseudomonas syringae pv. syringae B728a

    DNA-directed DNA polymerase
    SEED: Error-prone, lesion bypass DNA polymerase V (UmuC)
    KEGG: DNA polymerase V

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_4761 DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase no 0.48
    2 Psyr_2865 Hydrophobe/amphiphile efflux-1 HAE1 no 0.42
    3 Psyr_2745 Pyridoxal-5'-phosphate-dependent enzyme, beta subunit:Ornithine cyclodeaminase/mu-crystallin no 0.42
    4 Psyr_1169 nucleoside-binding protein no 0.39
    5 Psyr_3676 adenosylcobyric acid synthase (glutamine-hydrolysing) no 0.39
    6 Psyr_1792 Amino acid adenylation no 0.38
    7 Psyr_2686 carbamate kinase no 0.38
    8 Psyr_1104 Heme oxygenase no 0.38
    9 Psyr_0929 Glycosyl transferase, family 2 no 0.38
    10 Psyr_1496 Copper resistance D no 0.38
    11 Psyr_2524 conserved hypothetical protein no 0.38
    12 Psyr_2905 ABC transporter no 0.37
    13 Psyr_1893 Isochorismatase hydrolase no 0.37
    14 Psyr_2150 protein of unknown function DUF903 no 0.37
    15 Psyr_2450 PAS no 0.37
    16 Psyr_0772 Protein of unknown function DUF1355 no 0.37
    17 Psyr_2374 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal no 0.36
    18 Psyr_2741 Beta-lactamase no 0.36
    19 Psyr_2364 conserved hypothetical protein no 0.36
    20 Psyr_3938 Amidase no 0.36

    Or look for negative cofitness