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  • Top cofit genes for Psyr_1339 from Pseudomonas syringae pv. syringae B728a

    conserved hypothetical protein
    SEED: Transcription-repair coupling factor (superfamily II helicase)

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1487 conserved hypothetical protein no 0.39
    2 Psyr_1706 General substrate transporter:Major facilitator superfamily no 0.38
    3 Psyr_2615 Amino acid adenylation no 0.37
    4 Psyr_1670 Short-chain dehydrogenase/reductase SDR no 0.36
    5 Psyr_3704 conserved hypothetical protein no 0.35
    6 Psyr_2608 Amino acid adenylation no 0.35
    7 Psyr_1705 Amino acid adenylation no 0.35
    8 Psyr_1218 type III helper protein HrpK1 no 0.34
    9 Psyr_0543 Type I secretion outer membrane protein, TolC no 0.33
    10 Psyr_2616 Amino acid adenylation no 0.33
    11 Psyr_1328 glycerol-3-phosphate acyltransferase no 0.32
    12 Psyr_4244 hypothetical protein no 0.32
    13 Psyr_3843 diguanylate cyclase/phosphodiesterase no 0.32
    14 Psyr_1714 exonuclease SbcC no 0.32
    15 Psyr_2072 conserved hypothetical protein no 0.32
    16 Psyr_1618 Dihydrodipicolinate synthetase no 0.32
    17 Psyr_2037 Fimbrial biogenesis outer membrane usher protein no 0.31
    18 Psyr_2614 Amino acid adenylation no 0.31
    19 Psyr_2519 Aldo/keto reductase no 0.31
    20 Psyr_1729 transcriptional regulator, MarR family no 0.31

    Or look for negative cofitness