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  • Top cofit genes for Psyr_1298 from Pseudomonas syringae pv. syringae B728a

    exonuclease RecJ
    SEED: Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-)
    KEGG: single-stranded-DNA-specific exonuclease

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1888 CDS no 0.42
    2 Psyr_2478 surface antigen (D15):Surface antigen variable number 0.71 0.42
    3 Psyr_3935 Short-chain dehydrogenase/reductase SDR no 0.39
    4 Psyr_4054 hypothetical protein no 0.37
    5 Psyr_3555 aspartate kinase 0.76 0.36
    6 Psyr_2021 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal no 0.36
    7 Psyr_2709 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region no 0.36
    8 Psyr_4520 Excinuclease ABC subunit A 0.82 0.35
    9 Psyr_1974 Excinuclease ABC subunit B 0.77 0.34
    10 Psyr_0248 conserved hypothetical protein no 0.34
    11 Psyr_3083 RND efflux system, outer membrane lipoprotein, NodT no 0.34
    12 Psyr_2334 Binding-protein-dependent transport systems inner membrane component 0.35 0.34
    13 Psyr_4971 Sel1-like repeat protein no 0.33
    14 Psyr_3583 condensin subunit ScpB no 0.33
    15 Psyr_0587 Radical SAM no 0.33
    16 Psyr_0912 DnaJ domain protein no 0.33
    17 Psyr_2545 Metallophosphoesterase no 0.33
    18 Psyr_2175 L-carnitine dehydratase/bile acid-inducible protein F 0.25 0.33
    19 Psyr_0419 conserved hypothetical protein 0.41 0.33
    20 Psyr_3466 Flagellin, C-terminal:Flagellin, N-terminal 0.35 0.33

    Or look for negative cofitness