Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Top cofit genes for Psyr_1220 from
Pseudomonas syringae pv. syringae B728a
type III effector HopX1
SEED: AvrPphE
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_0040
OsmC-like protein
no
0.39
2
Psyr
_4493
PAS:GGDEF
no
0.34
3
Psyr
_0347
hypothetical protein
no
0.34
4
Psyr
_4043
hypothetical protein
no
0.33
5
Psyr
_4444
Protein of unknown function DUF6
no
0.33
6
Psyr
_2231
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
no
0.32
7
Psyr
_3631
GreA/GreB family elongation factor
no
0.32
8
Psyr
_4770
diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
no
0.32
9
Psyr
_4723
hypothetical protein
no
0.32
10
Psyr
_3306
Glycoside hydrolase, family 5
no
0.32
11
Psyr
_1276
conserved hypothetical protein
no
0.31
12
Psyr
_4339
ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase
no
0.30
13
Psyr
_4023
conserved hypothetical protein
no
0.30
14
Psyr
_1156
Peptidase M20A, peptidase V
no
0.30
15
Psyr
_0085
conserved hypothetical protein
no
0.30
16
Psyr
_0612
Nucleotidyl transferase
no
0.30
17
Psyr
_2604
conserved hypothetical protein; putative membrane protein
no
0.30
18
Psyr
_3719
hypothetical protein
no
0.29
19
Psyr
_3727
conserved hypothetical protein
no
0.29
20
Psyr
_3329
diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)
no
0.29
Or look for
negative cofitness