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  • Top cofit genes for Psyr_1119 from Pseudomonas syringae pv. syringae B728a

    Helix-turn-helix protein RpiR:Sugar isomerase (SIS)
    SEED: Phosphogluconate repressor HexR, RpiR family

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_0401 Malate dehydrogenase (oxaloacetate decarboxylating) (NADP+) 0.73 0.60
    2 Psyr_3572 acetyl-coenzyme A synthetase 0.75 0.58
    3 Psyr_1318 Phosphoenolpyruvate carboxylase 0.54 0.56
    4 Psyr_4277 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region no 0.54
    5 Psyr_1254 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase no 0.52
    6 Psyr_4700 malate synthase 0.59 0.52
    7 Psyr_3275 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) 0.39 0.50
    8 Psyr_4228 transcriptional regulator, GntR family 0.33 0.47
    9 Psyr_3238 3-oxoacid CoA-transferase no 0.47
    10 Psyr_3498 Conserved hypothetical protein 730 0.67 0.45
    11 Psyr_3237 3-oxoacid CoA-transferase no 0.43
    12 Psyr_1148 branched chain amino acid aminotransferase apoenzyme 0.69 0.42
    13 Psyr_3250 Helix-turn-helix motif protein 0.66 0.42
    14 Psyr_0544 hydroxymethylpyrimidine synthase 0.34 0.40
    15 Psyr_3236 transcriptional regulator, LysR family 0.43 0.40
    16 Psyr_3196 isocitrate lyase 0.49 0.40
    17 Psyr_1066 PhoH-like protein no 0.39
    18 Psyr_0824 acetyl-CoA acetyltransferase 0.16 0.39
    19 Psyr_3286 conserved hypothetical protein 0.49 0.39
    20 Psyr_1915 Peptidase M20:Peptidase M20 no 0.39

    Or look for negative cofitness