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  • Top cofit genes for Psyr_1107 from Pseudomonas syringae pv. syringae B728a

    Sigma-70 region 2
    SEED: FIG006045: Sigma factor, ECF subfamily

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_2130 4-hydroxyphenylpyruvate dioxygenase no 0.45
    2 Psyr_1080 Excinuclease ABC, C subunit, N-terminal no 0.45
    3 Psyr_2469 Propionyl-CoA carboxylase no 0.45
    4 Psyr_3404 aconitase no 0.44
    5 Psyr_3280 methylthioadenosine phosphorylase no 0.44
    6 Psyr_2402 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II no 0.43
    7 Psyr_2296 Aldo/keto reductase no 0.42
    8 Psyr_2685 ornithine carbamoyltransferase no 0.41
    9 Psyr_4573 Histidine triad (HIT) protein no 0.40
    10 Psyr_0248 conserved hypothetical protein no 0.40
    11 Psyr_1758 extracellular solute-binding protein, family 5 0.47 0.40
    12 Psyr_2925 Helix-turn-helix motif protein no 0.39
    13 Psyr_1253 2-keto-4-methylthiobutyrate aminotransferase apoenzyme no 0.39
    14 Psyr_0806 conserved hypothetical protein no 0.39
    15 Psyr_1559 luciferase no 0.38
    16 Psyr_0432 conserved hypothetical protein no 0.38
    17 Psyr_0957 Protein of unknown function DUF1365 0.58 0.38
    18 Psyr_4171 Twin-arginine translocation pathway signal no 0.37
    19 Psyr_4272 Protein of unknown function DUF466 no 0.36
    20 Psyr_2634 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer no 0.36

    Or look for negative cofitness