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  • Top cofit genes for Psyr_1095 from Pseudomonas syringae pv. syringae B728a

    Glycine cleavage system T protein
    SEED: Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10)
    KEGG: aminomethyltransferase

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1198 type III secretion protein HrpF no 0.43
    2 Psyr_2256 ABC transporter no 0.43
    3 Psyr_2335 ABC transporter no 0.41
    4 Psyr_4659 type III effector HopAB1 no 0.41
    5 Psyr_2686 carbamate kinase 0.20 0.40
    6 Psyr_3866 conserved hypothetical protein no 0.39
    7 Psyr_4336 ribosomal large subunit pseudouridine synthase E no 0.39
    8 Psyr_2211 monooxygenase, NtaA/SnaA/SoxA family no 0.38
    9 Psyr_0699 CDS no 0.37
    10 Psyr_3626 transcriptional regulator, MarR family no 0.37
    11 Psyr_4262 lipoprotein, putative no 0.36
    12 Psyr_3908 L-aspartate-binding protein / L-glutamate-binding protein no 0.36
    13 Psyr_1057 alginate biosynthesis protein AlgX no 0.36
    14 Psyr_2123 protocatechuate 3,4-dioxygenase, alpha subunit 0.22 0.36
    15 Psyr_1540 hypothetical protein no 0.36
    16 Psyr_4945 Formate dehydrogenase, subunit FdhD no 0.36
    17 Psyr_2150 protein of unknown function DUF903 no 0.35
    18 Psyr_2668 Helix-turn-helix, Fis-type no 0.35
    19 Psyr_4419 Cobalamin (vitamin B12) biosynthesis CbiD protein no 0.35
    20 Psyr_3459 Helix-turn-helix, Fis-type no 0.35

    Or look for negative cofitness