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  • Top cofit genes for Psyr_1059 from Pseudomonas syringae pv. syringae B728a

    alginate export porin

    Rank Hit Name Description Conserved? Cofitness  
    1 Psyr_1062 alginate biosynthesis protein Alg8 0.81 0.80
    2 Psyr_0219 phosphomannomutase 0.65 0.79
    3 Psyr_4130 Peptidase S1, chymotrypsin:PDZ/DHR/GLGF 0.61 0.79
    4 Psyr_1058 Parallel beta-helix repeat:Carbohydrate binding and sugar hydrolysis 0.85 0.78
    5 Psyr_1060 Sel1-like repeat protein 0.81 0.77
    6 Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE 0.66 0.77
    7 Psyr_1063 GDP-mannose 6-dehydrogenase 0.57 0.75
    8 Psyr_1057 alginate biosynthesis protein AlgX 0.84 0.75
    9 Psyr_1055 Membrane bound O-acyl transferase, MBOAT 0.64 0.75
    10 Psyr_0555 Protein of unknown function DUF330 0.69 0.73
    11 Psyr_1054 alginate biosynthesis protein AlgJ 0.78 0.72
    12 Psyr_1053 alginate biosynthesis protein AlgF 0.59 0.71
    13 Psyr_1350 site-2 protease, Metallo peptidase, MEROPS family M50B 0.71 0.71
    14 Psyr_1200 outer-membrane type III secretion protein HrcC 0.68 0.71
    15 Psyr_1206 type III secretion protein HrcT 0.68 0.71
    16 Psyr_1210 type III secretion protein HrcQa no 0.71
    17 Psyr_4919 type III effector protein AvrPto1 0.66 0.71
    18 Psyr_1208 type III secretion protein HrcR 0.76 0.70
    19 Psyr_1205 type III secretion protein HrcU 0.61 0.70
    20 Psyr_1213 type III secretion cytoplasmic ATPase HrcN 0.65 0.70

    Or look for negative cofitness