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Cofit
Protein
Homologs
Top cofit genes for Psyr_1059 from
Pseudomonas syringae pv. syringae B728a
alginate export porin
Rank
Hit
Name
Description
Conserved?
Cofitness
1
Psyr
_1062
alginate biosynthesis protein Alg8
0.81
0.80
2
Psyr
_0219
phosphomannomutase
0.65
0.79
3
Psyr
_4130
Peptidase S1, chymotrypsin:PDZ/DHR/GLGF
0.61
0.79
4
Psyr
_1058
Parallel beta-helix repeat:Carbohydrate binding and sugar hydrolysis
0.85
0.78
5
Psyr
_1060
Sel1-like repeat protein
0.81
0.77
6
Psyr
_3958
RNA polymerase, sigma-24 subunit, RpoE
0.66
0.77
7
Psyr
_1063
GDP-mannose 6-dehydrogenase
0.57
0.75
8
Psyr
_1057
alginate biosynthesis protein AlgX
0.84
0.75
9
Psyr
_1055
Membrane bound O-acyl transferase, MBOAT
0.64
0.75
10
Psyr
_0555
Protein of unknown function DUF330
0.69
0.73
11
Psyr
_1054
alginate biosynthesis protein AlgJ
0.78
0.72
12
Psyr
_1053
alginate biosynthesis protein AlgF
0.59
0.71
13
Psyr
_1350
site-2 protease, Metallo peptidase, MEROPS family M50B
0.71
0.71
14
Psyr
_1200
outer-membrane type III secretion protein HrcC
0.68
0.71
15
Psyr
_1206
type III secretion protein HrcT
0.68
0.71
16
Psyr
_1210
type III secretion protein HrcQa
no
0.71
17
Psyr
_4919
type III effector protein AvrPto1
0.66
0.71
18
Psyr
_1208
type III secretion protein HrcR
0.76
0.70
19
Psyr
_1205
type III secretion protein HrcU
0.61
0.70
20
Psyr
_1213
type III secretion cytoplasmic ATPase HrcN
0.65
0.70
Or look for
negative cofitness